Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
Rfx3P48381 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Rfx3P48381 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Gm5745-201ENSMUST00000183748 313 ntBASIC11.62□□□□□ -0.55
Rfx3P48381 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.62□□□□□ -0.55
Rfx3P48381 Gm44397-201ENSMUST00000195950 113 ntBASIC11.62□□□□□ -0.55
Rfx3P48381 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.62□□□□□ -0.55
Rfx3P48381 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.62□□□□□ -0.55
Rfx3P48381 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.62□□□□□ -0.55
Rfx3P48381 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rfx3P48381 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Rfx3P48381 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.62□□□□□ -0.55
Rfx3P48381 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.62□□□□□ -0.55
Rfx3P48381 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rfx3P48381 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rfx3P48381 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rfx3P48381 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.61□□□□□ -0.55
Rfx3P48381 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Rfx3P48381 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Rfx3P48381 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Rfx3P48381 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Gm6447-201ENSMUST00000118905 835 ntBASIC11.61□□□□□ -0.55
Rfx3P48381 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.61□□□□□ -0.55
Rfx3P48381 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.61□□□□□ -0.55
Rfx3P48381 Gm15429-201ENSMUST00000151268 798 ntBASIC11.61□□□□□ -0.55
Rfx3P48381 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rfx3P48381 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Rfx3P48381 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.61□□□□□ -0.55
Rfx3P48381 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Rfx3P48381 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.61□□□□□ -0.55
Rfx3P48381 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfx3P48381 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms