Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.57□□□□□ -0.4
Gli1P47806 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gli1P47806 Gm10478-201ENSMUST00000084451 396 ntBASIC12.57□□□□□ -0.4
Gli1P47806 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gli1P47806 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Gli1P47806 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gli1P47806 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gli1P47806 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gli1P47806 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gli1P47806 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gli1P47806 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gli1P47806 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gli1P47806 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gli1P47806 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Gli1P47806 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Gli1P47806 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.56□□□□□ -0.4
Gli1P47806 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.56□□□□□ -0.4
Gli1P47806 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gli1P47806 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.56□□□□□ -0.4
Gli1P47806 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gli1P47806 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.56□□□□□ -0.4
Gli1P47806 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.56□□□□□ -0.4
Gli1P47806 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Gli1P47806 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Gm13392-201ENSMUST00000117708 150 ntBASIC12.56□□□□□ -0.4
Gli1P47806 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Gli1P47806 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.56□□□□□ -0.4
Gli1P47806 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.56□□□□□ -0.4
Gli1P47806 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Gli1P47806 Gm27772-201ENSMUST00000184900 187 ntBASIC12.56□□□□□ -0.4
Gli1P47806 Gm42693-201ENSMUST00000196779 631 ntBASIC12.56□□□□□ -0.4
Gli1P47806 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.56□□□□□ -0.4
Gli1P47806 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Gli1P47806 Olfr582-201ENSMUST00000098212 960 ntBASIC12.56□□□□□ -0.4
Gli1P47806 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gli1P47806 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Gli1P47806 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.56□□□□□ -0.4
Gli1P47806 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gli1P47806 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
Gli1P47806 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.55□□□□□ -0.4
Gli1P47806 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Gli1P47806 Matn2-203ENSMUST00000226766 3252 ntBASIC12.55□□□□□ -0.4
Gli1P47806 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gli1P47806 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Gli1P47806 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.55□□□□□ -0.4
Gli1P47806 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.55□□□□□ -0.4
Gli1P47806 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gli1P47806 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.55□□□□□ -0.4
Gli1P47806 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.55□□□□□ -0.4
Gli1P47806 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.55□□□□□ -0.4
Gli1P47806 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.55□□□□□ -0.4
Gli1P47806 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gli1P47806 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.55□□□□□ -0.4
Gli1P47806 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.55□□□□□ -0.4
Gli1P47806 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Gli1P47806 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms