Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.62□□□□□ -0.71
Hist1h1aP43275 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Gm15376-201ENSMUST00000122258 783 ntBASIC10.62□□□□□ -0.71
Hist1h1aP43275 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Gm26464-201ENSMUST00000157094 305 ntBASIC10.62□□□□□ -0.71
Hist1h1aP43275 Mir7684-201ENSMUST00000183858 60 ntBASIC10.62□□□□□ -0.71
Hist1h1aP43275 Mir8102-201ENSMUST00000184148 139 ntBASIC10.62□□□□□ -0.71
Hist1h1aP43275 Gm29667-201ENSMUST00000190817 490 ntBASIC10.62□□□□□ -0.71
Hist1h1aP43275 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.62□□□□□ -0.71
Hist1h1aP43275 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.62□□□□□ -0.71
Hist1h1aP43275 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Hist1h1aP43275 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.61□□□□□ -0.71
Hist1h1aP43275 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Gm12151-201ENSMUST00000121374 290 ntBASIC10.61□□□□□ -0.71
Hist1h1aP43275 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.61□□□□□ -0.71
Hist1h1aP43275 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Gm28760-201ENSMUST00000185995 736 ntBASIC10.61□□□□□ -0.71
Hist1h1aP43275 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.61□□□□□ -0.71
Hist1h1aP43275 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.61□□□□□ -0.71
Hist1h1aP43275 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.61□□□□□ -0.71
Hist1h1aP43275 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hist1h1aP43275 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms