Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.32□□□□□ -0.44
Tnfsf9P41274 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf9P41274 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Tnfsf9P41274 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.32□□□□□ -0.44
Tnfsf9P41274 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf9P41274 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.31□□□□□ -0.44
Tnfsf9P41274 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Gm38158-201ENSMUST00000194617 339 ntBASIC12.31□□□□□ -0.44
Tnfsf9P41274 Gm6334-201ENSMUST00000207083 228 ntBASIC12.31□□□□□ -0.44
Tnfsf9P41274 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Gm7046-201ENSMUST00000221351 977 ntBASIC12.31□□□□□ -0.44
Tnfsf9P41274 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf9P41274 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.3□□□□□ -0.44
Tnfsf9P41274 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Gm2991-201ENSMUST00000173338 480 ntBASIC12.3□□□□□ -0.44
Tnfsf9P41274 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.3□□□□□ -0.44
Tnfsf9P41274 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Cts7-204ENSMUST00000225321 1257 ntBASIC12.3□□□□□ -0.44
Tnfsf9P41274 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tnfsf9P41274 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms