Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox6P40645 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Mir7654-201ENSMUST00000185082 70 ntBASIC12.09□□□□□ -0.47
Sox6P40645 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.09□□□□□ -0.47
Sox6P40645 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Sox6P40645 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sox6P40645 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sox6P40645 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sox6P40645 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sox6P40645 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox6P40645 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox6P40645 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.08□□□□□ -0.48
Sox6P40645 Gm7063-201ENSMUST00000186840 981 ntBASIC12.08□□□□□ -0.48
Sox6P40645 Gm38144-201ENSMUST00000192790 465 ntBASIC12.08□□□□□ -0.48
Sox6P40645 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.08□□□□□ -0.48
Sox6P40645 Gm38223-201ENSMUST00000194484 695 ntBASIC12.08□□□□□ -0.48
Sox6P40645 Gm42550-201ENSMUST00000201553 960 ntBASIC12.08□□□□□ -0.48
Sox6P40645 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.08□□□□□ -0.48
Sox6P40645 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sox6P40645 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sox6P40645 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sox6P40645 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox6P40645 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Sox6P40645 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox6P40645 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox6P40645 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox6P40645 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.07□□□□□ -0.48
Sox6P40645 Gm14928-201ENSMUST00000120198 477 ntBASIC12.07□□□□□ -0.48
Sox6P40645 Gm23984-201ENSMUST00000157139 203 ntBASIC12.07□□□□□ -0.48
Sox6P40645 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.07□□□□□ -0.48
Sox6P40645 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.07□□□□□ -0.48
Sox6P40645 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.07□□□□□ -0.48
Sox6P40645 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox6P40645 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox6P40645 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.07□□□□□ -0.48
Sox6P40645 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox6P40645 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Sox6P40645 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Sox6P40645 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox6P40645 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox6P40645 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms