Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.67□□□□□ -0.38
Cd9P40240 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cd9P40240 Gm12390-201ENSMUST00000117897 397 ntBASIC12.67□□□□□ -0.38
Cd9P40240 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cd9P40240 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Cd9P40240 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.67□□□□□ -0.38
Cd9P40240 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.67□□□□□ -0.38
Cd9P40240 Gm43818-201ENSMUST00000200605 466 ntBASIC12.67□□□□□ -0.38
Cd9P40240 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.67□□□□□ -0.38
Cd9P40240 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.67□□□□□ -0.38
Cd9P40240 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.67□□□□□ -0.38
Cd9P40240 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Gm10268-201ENSMUST00000085340 555 ntBASIC12.67□□□□□ -0.38
Cd9P40240 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.67□□□□□ -0.38
Cd9P40240 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cd9P40240 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cd9P40240 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.67□□□□□ -0.38
Cd9P40240 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd9P40240 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cd9P40240 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.66□□□□□ -0.38
Cd9P40240 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cd9P40240 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.66□□□□□ -0.38
Cd9P40240 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.66□□□□□ -0.38
Cd9P40240 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.66□□□□□ -0.38
Cd9P40240 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cd9P40240 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.66□□□□□ -0.38
Cd9P40240 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.66□□□□□ -0.38
Cd9P40240 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.66□□□□□ -0.38
Cd9P40240 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.66□□□□□ -0.38
Cd9P40240 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.66□□□□□ -0.38
Cd9P40240 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.66□□□□□ -0.38
Cd9P40240 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cd9P40240 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Cd9P40240 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cd9P40240 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Cd9P40240 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Cd9P40240 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Cd9P40240 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cd9P40240 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd9P40240 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cd9P40240 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.65□□□□□ -0.38
Cd9P40240 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.65□□□□□ -0.38
Cd9P40240 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cd9P40240 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cd9P40240 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.65□□□□□ -0.38
Cd9P40240 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.65□□□□□ -0.38
Cd9P40240 Gm13492-201ENSMUST00000119772 665 ntBASIC12.65□□□□□ -0.38
Cd9P40240 Gm1335-201ENSMUST00000121653 386 ntBASIC12.65□□□□□ -0.38
Cd9P40240 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.65□□□□□ -0.38
Cd9P40240 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms