Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm44069-201ENSMUST00000204898 506 ntBASIC10.57□□□□□ -0.72
Timp3P39876 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.57□□□□□ -0.72
Timp3P39876 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.57□□□□□ -0.72
Timp3P39876 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.57□□□□□ -0.72
Timp3P39876 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Timp3P39876 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
Timp3P39876 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Timp3P39876 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Timp3P39876 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Timp3P39876 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.56□□□□□ -0.72
Timp3P39876 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.56□□□□□ -0.72
Timp3P39876 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.56□□□□□ -0.72
Timp3P39876 Gm13369-201ENSMUST00000119442 987 ntBASIC10.56□□□□□ -0.72
Timp3P39876 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.56□□□□□ -0.72
Timp3P39876 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
Timp3P39876 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Timp3P39876 Gm19309-201ENSMUST00000218295 205 ntBASIC10.56□□□□□ -0.72
Timp3P39876 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Gm7399-201ENSMUST00000032395 858 ntBASIC10.56□□□□□ -0.72
Timp3P39876 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Snora73a-201ENSMUST00000082453 205 ntBASIC10.56□□□□□ -0.72
Timp3P39876 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.56□□□□□ -0.72
Timp3P39876 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.56□□□□□ -0.72
Timp3P39876 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Timp3P39876 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.56□□□□□ -0.72
Timp3P39876 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.56□□□□□ -0.72
Timp3P39876 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Timp3P39876 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Timp3P39876 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Timp3P39876 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Timp3P39876 Gm15198-201ENSMUST00000117283 177 ntBASIC10.55□□□□□ -0.72
Timp3P39876 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Gm11637-201ENSMUST00000120601 592 ntBASIC10.55□□□□□ -0.72
Timp3P39876 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.55□□□□□ -0.72
Timp3P39876 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Timp3P39876 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
Timp3P39876 Mir6420-201ENSMUST00000185032 102 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms