Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fen1P39749 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fen1P39749 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fen1P39749 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fen1P39749 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.96□□□□□ -0.34
Fen1P39749 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.96□□□□□ -0.34
Fen1P39749 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.95□□□□□ -0.34
Fen1P39749 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Fen1P39749 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Fen1P39749 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.95□□□□□ -0.34
Fen1P39749 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.95□□□□□ -0.34
Fen1P39749 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Fen1P39749 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Fen1P39749 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.95□□□□□ -0.34
Fen1P39749 Gm4875-201ENSMUST00000118257 786 ntBASIC12.95□□□□□ -0.34
Fen1P39749 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.95□□□□□ -0.34
Fen1P39749 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.95□□□□□ -0.34
Fen1P39749 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.95□□□□□ -0.34
Fen1P39749 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.95□□□□□ -0.34
Fen1P39749 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Fen1P39749 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Fen1P39749 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.95□□□□□ -0.34
Fen1P39749 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.95□□□□□ -0.34
Fen1P39749 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.95□□□□□ -0.34
Fen1P39749 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fen1P39749 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Fen1P39749 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Fen1P39749 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.94□□□□□ -0.34
Fen1P39749 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Gm27680-201ENSMUST00000184192 160 ntBASIC12.94□□□□□ -0.34
Fen1P39749 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.94□□□□□ -0.34
Fen1P39749 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Fen1P39749 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fen1P39749 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.93□□□□□ -0.34
Fen1P39749 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Fen1P39749 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.93□□□□□ -0.34
Fen1P39749 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Fen1P39749 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Fen1P39749 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.93□□□□□ -0.34
Fen1P39749 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms