Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HmgclP38060 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
HmgclP38060 Gm12384-201ENSMUST00000119228 919 ntBASIC12.67□□□□□ -0.38
HmgclP38060 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HmgclP38060 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.67□□□□□ -0.38
HmgclP38060 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.67□□□□□ -0.38
HmgclP38060 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.67□□□□□ -0.38
HmgclP38060 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.67□□□□□ -0.38
HmgclP38060 Gm40466-201ENSMUST00000212174 422 ntBASIC12.67□□□□□ -0.38
HmgclP38060 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.67□□□□□ -0.38
HmgclP38060 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HmgclP38060 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HmgclP38060 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.67□□□□□ -0.38
HmgclP38060 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HmgclP38060 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HmgclP38060 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.66□□□□□ -0.38
HmgclP38060 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.66□□□□□ -0.38
HmgclP38060 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.66□□□□□ -0.38
HmgclP38060 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.66□□□□□ -0.38
HmgclP38060 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.66□□□□□ -0.38
HmgclP38060 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.66□□□□□ -0.38
HmgclP38060 Gm18187-201ENSMUST00000196476 984 ntBASIC12.66□□□□□ -0.38
HmgclP38060 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.66□□□□□ -0.38
HmgclP38060 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
HmgclP38060 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HmgclP38060 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HmgclP38060 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.66□□□□□ -0.38
HmgclP38060 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.66□□□□□ -0.38
HmgclP38060 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.66□□□□□ -0.38
HmgclP38060 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HmgclP38060 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HmgclP38060 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HmgclP38060 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HmgclP38060 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HmgclP38060 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HmgclP38060 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HmgclP38060 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HmgclP38060 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HmgclP38060 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HmgclP38060 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.65□□□□□ -0.38
HmgclP38060 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.65□□□□□ -0.38
HmgclP38060 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HmgclP38060 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.65□□□□□ -0.38
HmgclP38060 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.65□□□□□ -0.38
HmgclP38060 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HmgclP38060 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HmgclP38060 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HmgclP38060 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HmgclP38060 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HmgclP38060 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HmgclP38060 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
HmgclP38060 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
HmgclP38060 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms