Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm29396-201ENSMUST00000185659 716 ntBASIC12.48□□□□□ -0.41
Hoxc11P31313 Gm4768-201ENSMUST00000206199 686 ntBASIC12.48□□□□□ -0.41
Hoxc11P31313 Olfr284-202ENSMUST00000206647 966 ntBASIC12.48□□□□□ -0.41
Hoxc11P31313 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.48□□□□□ -0.41
Hoxc11P31313 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.48□□□□□ -0.41
Hoxc11P31313 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxc11P31313 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.48□□□□□ -0.41
Hoxc11P31313 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc11P31313 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.47□□□□□ -0.41
Hoxc11P31313 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxc11P31313 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.47□□□□□ -0.41
Hoxc11P31313 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.47□□□□□ -0.41
Hoxc11P31313 Gm11978-201ENSMUST00000122315 466 ntBASIC12.47□□□□□ -0.41
Hoxc11P31313 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxc11P31313 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Gm26185-201ENSMUST00000157692 266 ntBASIC12.47□□□□□ -0.41
Hoxc11P31313 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.47□□□□□ -0.41
Hoxc11P31313 Gm18935-201ENSMUST00000212692 664 ntBASIC12.47□□□□□ -0.41
Hoxc11P31313 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxc11P31313 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.47□□□□□ -0.41
Hoxc11P31313 Gm19163-201ENSMUST00000223313 780 ntBASIC12.47□□□□□ -0.41
Hoxc11P31313 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Hoxc11P31313 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hoxc11P31313 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc11P31313 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc11P31313 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc11P31313 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.47□□□□□ -0.41
Hoxc11P31313 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc11P31313 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc11P31313 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hoxc11P31313 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.46□□□□□ -0.41
Hoxc11P31313 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxc11P31313 Gm11591-201ENSMUST00000120063 702 ntBASIC12.46□□□□□ -0.41
Hoxc11P31313 Gm13342-201ENSMUST00000121055 207 ntBASIC12.46□□□□□ -0.41
Hoxc11P31313 Gm13786-201ENSMUST00000122371 333 ntBASIC12.46□□□□□ -0.41
Hoxc11P31313 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Gm6222-202ENSMUST00000182143 629 ntBASIC12.46□□□□□ -0.41
Hoxc11P31313 Gm27516-201ENSMUST00000184237 98 ntBASIC12.46□□□□□ -0.41
Hoxc11P31313 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.46□□□□□ -0.41
Hoxc11P31313 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.46□□□□□ -0.41
Hoxc11P31313 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.46□□□□□ -0.41
Hoxc11P31313 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hoxc11P31313 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hoxc11P31313 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.46□□□□□ -0.41
Hoxc11P31313 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hoxc11P31313 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc11P31313 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Hoxc11P31313 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc11P31313 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc11P31313 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc11P31313 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Hoxc11P31313 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc11P31313 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc11P31313 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc11P31313 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms