Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.85□□□□□ -0.51
Nedd8P29595 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nedd8P29595 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nedd8P29595 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Nedd8P29595 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.84□□□□□ -0.51
Nedd8P29595 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Gm24589-201ENSMUST00000116692 94 ntBASIC11.84□□□□□ -0.51
Nedd8P29595 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.84□□□□□ -0.51
Nedd8P29595 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.84□□□□□ -0.51
Nedd8P29595 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Mir5131-201ENSMUST00000175426 93 ntBASIC11.84□□□□□ -0.51
Nedd8P29595 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nedd8P29595 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.84□□□□□ -0.51
Nedd8P29595 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Nedd8P29595 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.84□□□□□ -0.51
Nedd8P29595 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.84□□□□□ -0.51
Nedd8P29595 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.84□□□□□ -0.51
Nedd8P29595 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.84□□□□□ -0.51
Nedd8P29595 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.84□□□□□ -0.51
Nedd8P29595 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Nedd8P29595 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Nedd8P29595 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.84□□□□□ -0.51
Nedd8P29595 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nedd8P29595 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nedd8P29595 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nedd8P29595 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nedd8P29595 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.51
Nedd8P29595 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Nedd8P29595 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nedd8P29595 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Nedd8P29595 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.83□□□□□ -0.51
Nedd8P29595 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.83□□□□□ -0.51
Nedd8P29595 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Nedd8P29595 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.83□□□□□ -0.52
Nedd8P29595 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.83□□□□□ -0.52
Nedd8P29595 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.83□□□□□ -0.52
Nedd8P29595 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Nedd8P29595 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.83□□□□□ -0.52
Nedd8P29595 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nedd8P29595 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.83□□□□□ -0.52
Nedd8P29595 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nedd8P29595 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.83□□□□□ -0.52
Nedd8P29595 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nedd8P29595 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms