Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm15276-201ENSMUST00000145953 498 ntBASIC13.73□□□□□ -0.21
Mmp3P28862 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.73□□□□□ -0.21
Mmp3P28862 Gm18827-201ENSMUST00000188341 790 ntBASIC13.73□□□□□ -0.21
Mmp3P28862 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.73□□□□□ -0.21
Mmp3P28862 AA914427-201ENSMUST00000193194 1166 ntBASIC13.73□□□□□ -0.21
Mmp3P28862 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.73□□□□□ -0.21
Mmp3P28862 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.73□□□□□ -0.21
Mmp3P28862 Gm44967-201ENSMUST00000207047 631 ntBASIC13.73□□□□□ -0.21
Mmp3P28862 Gm8712-201ENSMUST00000221090 701 ntBASIC13.73□□□□□ -0.21
Mmp3P28862 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.73□□□□□ -0.21
Mmp3P28862 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.73□□□□□ -0.21
Mmp3P28862 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Mmp3P28862 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Mmp3P28862 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Mmp3P28862 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Mmp3P28862 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Mmp3P28862 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Mmp3P28862 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.72□□□□□ -0.21
Mmp3P28862 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Mmp3P28862 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Mmp3P28862 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Mmp3P28862 Gm27046-201ENSMUST00000182160 463 ntBASIC13.72□□□□□ -0.21
Mmp3P28862 Gm8885-201ENSMUST00000189382 598 ntBASIC13.72□□□□□ -0.21
Mmp3P28862 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Mmp3P28862 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.72□□□□□ -0.21
Mmp3P28862 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.72□□□□□ -0.21
Mmp3P28862 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.72□□□□□ -0.21
Mmp3P28862 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp3P28862 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.72□□□□□ -0.21
Mmp3P28862 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.72□□□□□ -0.21
Mmp3P28862 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.71□□□□□ -0.21
Mmp3P28862 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Mmp3P28862 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.71□□□□□ -0.21
Mmp3P28862 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.71□□□□□ -0.21
Mmp3P28862 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.71□□□□□ -0.21
Mmp3P28862 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Mmp3P28862 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.71□□□□□ -0.21
Mmp3P28862 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.71□□□□□ -0.21
Mmp3P28862 Grk6-205ENSMUST00000224653 2976 ntBASIC13.71□□□□□ -0.21
Mmp3P28862 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.71□□□□□ -0.21
Mmp3P28862 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Mmp3P28862 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Mmp3P28862 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp3P28862 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Mmp3P28862 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Mmp3P28862 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp3P28862 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp3P28862 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp3P28862 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms