Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cd40lgP27548 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.9□□□□□ -0.5
Cd40lgP27548 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Gm22331-201ENSMUST00000158066 136 ntBASIC11.9□□□□□ -0.5
Cd40lgP27548 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.9□□□□□ -0.5
Cd40lgP27548 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.9□□□□□ -0.5
Cd40lgP27548 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.9□□□□□ -0.5
Cd40lgP27548 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cd40lgP27548 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Gm25857-201ENSMUST00000082788 129 ntBASIC11.9□□□□□ -0.5
Cd40lgP27548 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cd40lgP27548 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.9□□□□□ -0.5
Cd40lgP27548 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.9□□□□□ -0.5
Cd40lgP27548 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cd40lgP27548 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cd40lgP27548 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.89□□□□□ -0.51
Cd40lgP27548 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.89□□□□□ -0.51
Cd40lgP27548 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.89□□□□□ -0.51
Cd40lgP27548 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Cd40lgP27548 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.89□□□□□ -0.51
Cd40lgP27548 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Cd40lgP27548 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cd40lgP27548 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Cd40lgP27548 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.89□□□□□ -0.51
Cd40lgP27548 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cd40lgP27548 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.89□□□□□ -0.51
Cd40lgP27548 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cd40lgP27548 Gm6091-201ENSMUST00000098307 165 ntBASIC11.89□□□□□ -0.51
Cd40lgP27548 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.89□□□□□ -0.51
Cd40lgP27548 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cd40lgP27548 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.89□□□□□ -0.51
Cd40lgP27548 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd40lgP27548 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Gm12390-201ENSMUST00000117897 397 ntBASIC11.88□□□□□ -0.51
Cd40lgP27548 Gm11618-201ENSMUST00000117946 267 ntBASIC11.88□□□□□ -0.51
Cd40lgP27548 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Gm8810-201ENSMUST00000172895 754 ntBASIC11.88□□□□□ -0.51
Cd40lgP27548 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms