Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Nfkb1P25799 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nfkb1P25799 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nfkb1P25799 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.21□□□□□ -0.29
Nfkb1P25799 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nfkb1P25799 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nfkb1P25799 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nfkb1P25799 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Gm22323-201ENSMUST00000103832 109 ntBASIC13.21□□□□□ -0.29
Nfkb1P25799 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.21□□□□□ -0.29
Nfkb1P25799 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.21□□□□□ -0.29
Nfkb1P25799 Gm26083-201ENSMUST00000157904 193 ntBASIC13.21□□□□□ -0.29
Nfkb1P25799 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.21□□□□□ -0.29
Nfkb1P25799 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nfkb1P25799 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nfkb1P25799 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nfkb1P25799 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.21□□□□□ -0.3
Nfkb1P25799 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nfkb1P25799 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nfkb1P25799 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nfkb1P25799 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nfkb1P25799 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.2□□□□□ -0.3
Nfkb1P25799 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nfkb1P25799 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Gm10434-201ENSMUST00000101158 471 ntBASIC13.2□□□□□ -0.3
Nfkb1P25799 Gm14381-201ENSMUST00000122105 414 ntBASIC13.2□□□□□ -0.3
Nfkb1P25799 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.2□□□□□ -0.3
Nfkb1P25799 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.2□□□□□ -0.3
Nfkb1P25799 Gm4857-201ENSMUST00000192718 785 ntBASIC13.2□□□□□ -0.3
Nfkb1P25799 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.2□□□□□ -0.3
Nfkb1P25799 Grk6-205ENSMUST00000224653 2976 ntBASIC13.2□□□□□ -0.3
Nfkb1P25799 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.2□□□□□ -0.3
Nfkb1P25799 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nfkb1P25799 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nfkb1P25799 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nfkb1P25799 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Nfkb1P25799 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nfkb1P25799 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Nfkb1P25799 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Nfkb1P25799 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.19□□□□□ -0.3
Nfkb1P25799 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.19□□□□□ -0.3
Nfkb1P25799 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Nfkb1P25799 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nfkb1P25799 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms