Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prim1P20664 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prim1P20664 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prim1P20664 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prim1P20664 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prim1P20664 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Prim1P20664 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prim1P20664 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Prim1P20664 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Prim1P20664 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Gm14659-201ENSMUST00000117667 843 ntBASIC16.41■□□□□ 0.22
Prim1P20664 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.41■□□□□ 0.22
Prim1P20664 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.41■□□□□ 0.22
Prim1P20664 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.41■□□□□ 0.22
Prim1P20664 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.41■□□□□ 0.22
Prim1P20664 Gm38018-201ENSMUST00000195651 540 ntBASIC16.41■□□□□ 0.22
Prim1P20664 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.41■□□□□ 0.22
Prim1P20664 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 AC139323.1-201ENSMUST00000223370 1040 ntBASIC16.41■□□□□ 0.22
Prim1P20664 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Prim1P20664 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC16.41■□□□□ 0.22
Prim1P20664 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Prim1P20664 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prim1P20664 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Prim1P20664 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.4■□□□□ 0.22
Prim1P20664 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Gm23270-201ENSMUST00000104055 131 ntBASIC16.4■□□□□ 0.22
Prim1P20664 Gm11222-201ENSMUST00000119005 738 ntBASIC16.4■□□□□ 0.22
Prim1P20664 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.4■□□□□ 0.22
Prim1P20664 Gm24380-201ENSMUST00000122696 324 ntBASIC16.4■□□□□ 0.22
Prim1P20664 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC16.4■□□□□ 0.22
Prim1P20664 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC16.4■□□□□ 0.22
Prim1P20664 Gm27320-201ENSMUST00000184892 109 ntBASIC16.4■□□□□ 0.22
Prim1P20664 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.4■□□□□ 0.22
Prim1P20664 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC16.4■□□□□ 0.22
Prim1P20664 Gm9520-201ENSMUST00000209460 1253 ntBASIC16.4■□□□□ 0.22
Prim1P20664 Gm5904-201ENSMUST00000210286 865 ntBASIC16.4■□□□□ 0.22
Prim1P20664 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC16.4■□□□□ 0.22
Prim1P20664 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.4■□□□□ 0.22
Prim1P20664 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.4■□□□□ 0.22
Prim1P20664 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prim1P20664 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Prim1P20664 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prim1P20664 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prim1P20664 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prim1P20664 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prim1P20664 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prim1P20664 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prim1P20664 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Prim1P20664 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prim1P20664 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prim1P20664 Mir877-201ENSMUST00000104738 85 ntBASIC16.39■□□□□ 0.21
Prim1P20664 Gm15236-201ENSMUST00000117309 379 ntBASIC16.39■□□□□ 0.21
Prim1P20664 Gm13736-201ENSMUST00000119272 253 ntBASIC16.39■□□□□ 0.21
Prim1P20664 Gm14726-201ENSMUST00000120623 896 ntBASIC16.39■□□□□ 0.21
Prim1P20664 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.39■□□□□ 0.21
Prim1P20664 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Prim1P20664 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prim1P20664 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prim1P20664 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prim1P20664 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Prim1P20664 Gm20482-202ENSMUST00000174729 825 ntBASIC16.39■□□□□ 0.21
Prim1P20664 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prim1P20664 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.39■□□□□ 0.21
Prim1P20664 CT009711.2-202ENSMUST00000224538 973 ntBASIC16.39■□□□□ 0.21
Prim1P20664 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms