Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Gm37042-201ENSMUST00000193816 581 ntBASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Gm44607-201ENSMUST00000205611 1090 ntBASIC10.85□□□□□ -0.67
Ly6c1P0CW02 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Gm25131-201ENSMUST00000082653 151 ntBASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ly6c1P0CW02 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Gm25927-201ENSMUST00000175058 117 ntBASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Gm27514-201ENSMUST00000183692 110 ntBASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC10.84□□□□□ -0.67
Ly6c1P0CW02 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ly6c1P0CW02 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Ly6c1P0CW02 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Ly6c1P0CW02 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.83□□□□□ -0.68
Ly6c1P0CW02 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms