Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hoxb3P09026 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxb3P09026 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.88□□□□□ -0.35
Hoxb3P09026 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Gm13600-201ENSMUST00000117949 744 ntBASIC12.87□□□□□ -0.35
Hoxb3P09026 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Gm23218-201ENSMUST00000158124 276 ntBASIC12.87□□□□□ -0.35
Hoxb3P09026 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Gm4768-201ENSMUST00000206199 686 ntBASIC12.87□□□□□ -0.35
Hoxb3P09026 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.87□□□□□ -0.35
Hoxb3P09026 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Morn2-202ENSMUST00000227729 656 ntBASIC12.87□□□□□ -0.35
Hoxb3P09026 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Gm8385-201ENSMUST00000058999 643 ntBASIC12.87□□□□□ -0.35
Hoxb3P09026 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hoxb3P09026 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.87□□□□□ -0.35
Hoxb3P09026 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Hoxb3P09026 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.87□□□□□ -0.35
Hoxb3P09026 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.87□□□□□ -0.35
Hoxb3P09026 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxb3P09026 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxb3P09026 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.86□□□□□ -0.35
Hoxb3P09026 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.86□□□□□ -0.35
Hoxb3P09026 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Hoxb3P09026 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.86□□□□□ -0.35
Hoxb3P09026 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.86□□□□□ -0.35
Hoxb3P09026 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxb3P09026 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxb3P09026 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Gm9062-201ENSMUST00000117712 727 ntBASIC12.86□□□□□ -0.35
Hoxb3P09026 Gm8312-201ENSMUST00000119380 618 ntBASIC12.86□□□□□ -0.35
Hoxb3P09026 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.86□□□□□ -0.35
Hoxb3P09026 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.86□□□□□ -0.35
Hoxb3P09026 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Hoxb3P09026 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Hoxb3P09026 Gm4868-201ENSMUST00000164138 789 ntBASIC12.86□□□□□ -0.35
Hoxb3P09026 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.86□□□□□ -0.35
Hoxb3P09026 Gm3890-201ENSMUST00000182416 207 ntBASIC12.86□□□□□ -0.35
Hoxb3P09026 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Hoxb3P09026 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Hoxb3P09026 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Gm13097-201ENSMUST00000210722 397 ntBASIC12.86□□□□□ -0.35
Hoxb3P09026 Gm19212-201ENSMUST00000216642 862 ntBASIC12.86□□□□□ -0.35
Hoxb3P09026 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.86□□□□□ -0.35
Hoxb3P09026 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.86□□□□□ -0.35
Hoxb3P09026 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxb3P09026 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms