Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.62□□□□□ -0.23
TnfP06804 Gm14726-201ENSMUST00000120623 896 ntBASIC13.62□□□□□ -0.23
TnfP06804 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.62□□□□□ -0.23
TnfP06804 Gm26083-201ENSMUST00000157904 193 ntBASIC13.62□□□□□ -0.23
TnfP06804 Gm16296-201ENSMUST00000159905 325 ntBASIC13.62□□□□□ -0.23
TnfP06804 Gm20482-202ENSMUST00000174729 825 ntBASIC13.62□□□□□ -0.23
TnfP06804 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Gm45925-201ENSMUST00000218882 744 ntBASIC13.62□□□□□ -0.23
TnfP06804 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.62□□□□□ -0.23
TnfP06804 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.62□□□□□ -0.23
TnfP06804 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.62□□□□□ -0.23
TnfP06804 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.62□□□□□ -0.23
TnfP06804 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.62□□□□□ -0.23
TnfP06804 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.61□□□□□ -0.23
TnfP06804 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TnfP06804 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.61□□□□□ -0.23
TnfP06804 Gm11531-201ENSMUST00000117614 555 ntBASIC13.61□□□□□ -0.23
TnfP06804 Gm13875-201ENSMUST00000120162 282 ntBASIC13.61□□□□□ -0.23
TnfP06804 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.61□□□□□ -0.23
TnfP06804 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TnfP06804 Gm17376-201ENSMUST00000166016 84 ntBASIC13.61□□□□□ -0.23
TnfP06804 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.61□□□□□ -0.23
TnfP06804 Gm4857-201ENSMUST00000192718 785 ntBASIC13.61□□□□□ -0.23
TnfP06804 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.61□□□□□ -0.23
TnfP06804 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.61□□□□□ -0.23
TnfP06804 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.61□□□□□ -0.23
TnfP06804 Gm5950-201ENSMUST00000213337 772 ntBASIC13.61□□□□□ -0.23
TnfP06804 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.61□□□□□ -0.23
TnfP06804 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.61□□□□□ -0.23
TnfP06804 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TnfP06804 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TnfP06804 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.61□□□□□ -0.23
TnfP06804 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TnfP06804 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.61□□□□□ -0.23
TnfP06804 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.61□□□□□ -0.23
TnfP06804 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.61□□□□□ -0.23
TnfP06804 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TnfP06804 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.6□□□□□ -0.23
TnfP06804 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.6□□□□□ -0.23
TnfP06804 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.6□□□□□ -0.23
TnfP06804 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.6□□□□□ -0.23
TnfP06804 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.6□□□□□ -0.23
TnfP06804 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.6□□□□□ -0.23
TnfP06804 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TnfP06804 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.6□□□□□ -0.23
TnfP06804 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TnfP06804 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TnfP06804 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms