Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm9229-201ENSMUST00000222777 126 ntBASIC11.3□□□□□ -0.6
P04224 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
P04224 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.3□□□□□ -0.6
P04224 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
P04224 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04224 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.3□□□□□ -0.6
P04224 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
P04224 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
P04224 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.29□□□□□ -0.6
P04224 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.29□□□□□ -0.6
P04224 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.29□□□□□ -0.6
P04224 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P04224 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
P04224 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Gm4804-201ENSMUST00000182234 999 ntBASIC11.29□□□□□ -0.6
P04224 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P04224 Gm27397-201ENSMUST00000184997 107 ntBASIC11.29□□□□□ -0.6
P04224 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.29□□□□□ -0.6
P04224 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.29□□□□□ -0.6
P04224 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.29□□□□□ -0.6
P04224 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.29□□□□□ -0.6
P04224 Gm46209-201ENSMUST00000217912 553 ntBASIC11.29□□□□□ -0.6
P04224 Shd-206ENSMUST00000225145 998 ntBASIC11.29□□□□□ -0.6
P04224 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P04224 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P04224 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P04224 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.29□□□□□ -0.6
P04224 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
P04224 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
P04224 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P04224 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.29□□□□□ -0.6
P04224 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
P04224 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P04224 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.29□□□□□ -0.6
P04224 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04224 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.28□□□□□ -0.6
P04224 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
P04224 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
P04224 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P04224 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
P04224 Gm15770-201ENSMUST00000117498 584 ntBASIC11.28□□□□□ -0.6
P04224 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.28□□□□□ -0.6
P04224 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
P04224 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.28□□□□□ -0.6
P04224 Gm28630-201ENSMUST00000187806 498 ntBASIC11.28□□□□□ -0.6
P04224 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
P04224 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P04224 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.28□□□□□ -0.6
P04224 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04224 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms