Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3cP02301 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3cP02301 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3cP02301 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
H3f3cP02301 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
H3f3cP02301 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3cP02301 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
H3f3cP02301 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3cP02301 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3cP02301 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3cP02301 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3cP02301 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3cP02301 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.06□□□□□ -0.64
H3f3cP02301 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3cP02301 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
H3f3cP02301 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
H3f3cP02301 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
H3f3cP02301 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.05□□□□□ -0.64
H3f3cP02301 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
H3f3cP02301 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
H3f3cP02301 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.05□□□□□ -0.64
H3f3cP02301 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
H3f3cP02301 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Gm12390-201ENSMUST00000117897 397 ntBASIC11.05□□□□□ -0.64
H3f3cP02301 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
H3f3cP02301 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.05□□□□□ -0.64
H3f3cP02301 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.05□□□□□ -0.64
H3f3cP02301 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Gm28693-202ENSMUST00000190758 331 ntBASIC11.05□□□□□ -0.64
H3f3cP02301 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.05□□□□□ -0.64
H3f3cP02301 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.05□□□□□ -0.64
H3f3cP02301 Gm29705-201ENSMUST00000212598 474 ntBASIC11.05□□□□□ -0.64
H3f3cP02301 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
H3f3cP02301 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.05□□□□□ -0.64
H3f3cP02301 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
H3f3cP02301 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.05□□□□□ -0.64
H3f3cP02301 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.05□□□□□ -0.64
H3f3cP02301 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
H3f3cP02301 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
H3f3cP02301 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3cP02301 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
H3f3cP02301 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.05□□□□□ -0.64
H3f3cP02301 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
H3f3cP02301 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.04□□□□□ -0.64
H3f3cP02301 Gm11637-201ENSMUST00000120601 592 ntBASIC11.04□□□□□ -0.64
H3f3cP02301 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
H3f3cP02301 Gm2231-201ENSMUST00000125661 612 ntBASIC11.04□□□□□ -0.64
H3f3cP02301 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.04□□□□□ -0.64
H3f3cP02301 Gm4271-201ENSMUST00000174444 973 ntBASIC11.04□□□□□ -0.64
H3f3cP02301 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.04□□□□□ -0.64
H3f3cP02301 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.04□□□□□ -0.64
H3f3cP02301 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.04□□□□□ -0.64
H3f3cP02301 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.04□□□□□ -0.64
H3f3cP02301 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
H3f3cP02301 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms