Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
P01852 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.77□□□□□ -0.52
P01852 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01852 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.52
P01852 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01852 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01852 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01852 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01852 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01852 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01852 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
P01852 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01852 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P01852 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.77□□□□□ -0.52
P01852 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.77□□□□□ -0.53
P01852 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.77□□□□□ -0.53
P01852 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.77□□□□□ -0.53
P01852 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Gm26185-201ENSMUST00000157692 266 ntBASIC11.77□□□□□ -0.53
P01852 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
P01852 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.77□□□□□ -0.53
P01852 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.77□□□□□ -0.53
P01852 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
P01852 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.77□□□□□ -0.53
P01852 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.77□□□□□ -0.53
P01852 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
P01852 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.77□□□□□ -0.53
P01852 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
P01852 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
P01852 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P01852 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
P01852 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
P01852 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
P01852 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.76□□□□□ -0.53
P01852 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.76□□□□□ -0.53
P01852 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.76□□□□□ -0.53
P01852 Gm7029-201ENSMUST00000173226 450 ntBASIC11.76□□□□□ -0.53
P01852 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.76□□□□□ -0.53
P01852 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.76□□□□□ -0.53
P01852 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
P01852 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
P01852 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01852 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.75□□□□□ -0.53
P01852 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.75□□□□□ -0.53
P01852 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
P01852 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms