Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
TcraP01849 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.38□□□□□ -0.91
TcraP01849 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.38□□□□□ -0.91
TcraP01849 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.38□□□□□ -0.91
TcraP01849 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
TcraP01849 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC9.38□□□□□ -0.91
TcraP01849 Gm9719-201ENSMUST00000162765 543 ntBASIC9.38□□□□□ -0.91
TcraP01849 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
TcraP01849 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
TcraP01849 Gm10253-201ENSMUST00000194270 940 ntBASIC9.38□□□□□ -0.91
TcraP01849 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Gm7774-201ENSMUST00000200064 533 ntBASIC9.38□□□□□ -0.91
TcraP01849 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC9.38□□□□□ -0.91
TcraP01849 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.38□□□□□ -0.91
TcraP01849 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC9.38□□□□□ -0.91
TcraP01849 AC090659.2-201ENSMUST00000225378 1186 ntBASIC9.38□□□□□ -0.91
TcraP01849 AC149588.3-201ENSMUST00000227515 150 ntBASIC9.38□□□□□ -0.91
TcraP01849 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
TcraP01849 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.38□□□□□ -0.91
TcraP01849 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
TcraP01849 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
TcraP01849 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
TcraP01849 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.38□□□□□ -0.91
TcraP01849 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
TcraP01849 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.38□□□□□ -0.91
TcraP01849 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
TcraP01849 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.37□□□□□ -0.91
TcraP01849 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.37□□□□□ -0.91
TcraP01849 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
TcraP01849 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
TcraP01849 Gm5466-201ENSMUST00000119395 1890 ntBASIC9.37□□□□□ -0.91
TcraP01849 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.37□□□□□ -0.91
TcraP01849 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC9.37□□□□□ -0.91
TcraP01849 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC9.37□□□□□ -0.91
TcraP01849 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
TcraP01849 Gm6736-201ENSMUST00000166583 948 ntBASIC9.37□□□□□ -0.91
TcraP01849 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.37□□□□□ -0.91
TcraP01849 Gm43474-201ENSMUST00000196415 774 ntBASIC9.37□□□□□ -0.91
TcraP01849 Gm4971-201ENSMUST00000205991 1108 ntBASIC9.37□□□□□ -0.91
TcraP01849 Gm45841-201ENSMUST00000207700 164 ntBASIC9.37□□□□□ -0.91
TcraP01849 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC9.37□□□□□ -0.91
TcraP01849 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
TcraP01849 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms