Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ttc3O88196 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.38□□□□□ -0.27
Ttc3O88196 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Rprl1-202ENSMUST00000198476 238 ntBASIC13.38□□□□□ -0.27
Ttc3O88196 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ttc3O88196 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.38□□□□□ -0.27
Ttc3O88196 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ttc3O88196 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ttc3O88196 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ttc3O88196 Gm14277-201ENSMUST00000121195 360 ntBASIC13.38□□□□□ -0.27
Ttc3O88196 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.38□□□□□ -0.27
Ttc3O88196 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.38□□□□□ -0.27
Ttc3O88196 Gm18753-201ENSMUST00000201000 566 ntBASIC13.38□□□□□ -0.27
Ttc3O88196 Gm3786-201ENSMUST00000202659 378 ntBASIC13.38□□□□□ -0.27
Ttc3O88196 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.38□□□□□ -0.27
Ttc3O88196 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Ttc3O88196 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ttc3O88196 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.37□□□□□ -0.27
Ttc3O88196 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.37□□□□□ -0.27
Ttc3O88196 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ttc3O88196 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Gm8913-201ENSMUST00000209491 641 ntBASIC13.37□□□□□ -0.27
Ttc3O88196 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.37□□□□□ -0.27
Ttc3O88196 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ttc3O88196 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.37□□□□□ -0.27
Ttc3O88196 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ttc3O88196 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Gm15703-201ENSMUST00000120250 880 ntBASIC13.36□□□□□ -0.27
Ttc3O88196 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.36□□□□□ -0.27
Ttc3O88196 Gm27023-201ENSMUST00000182372 285 ntBASIC13.36□□□□□ -0.27
Ttc3O88196 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.36□□□□□ -0.27
Ttc3O88196 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.36□□□□□ -0.27
Ttc3O88196 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ttc3O88196 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.36□□□□□ -0.27
Ttc3O88196 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms