Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Gm6580-201ENSMUST00000117504 1357 ntBASIC16.35■□□□□ 0.21
Ubr1O70481 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ubr1O70481 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Ubr1O70481 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ubr1O70481 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Gm15595-201ENSMUST00000120840 961 ntBASIC16.34■□□□□ 0.21
Ubr1O70481 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC16.34■□□□□ 0.21
Ubr1O70481 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.34■□□□□ 0.21
Ubr1O70481 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Ubr1O70481 AC159819.2-201ENSMUST00000216151 342 ntBASIC16.34■□□□□ 0.21
Ubr1O70481 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ubr1O70481 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ubr1O70481 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ubr1O70481 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ubr1O70481 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Ubr1O70481 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.34■□□□□ 0.21
Ubr1O70481 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Ubr1O70481 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ubr1O70481 Gm9072-201ENSMUST00000218390 1514 ntBASIC16.34■□□□□ 0.21
Ubr1O70481 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ubr1O70481 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ubr1O70481 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC16.33■□□□□ 0.21
Ubr1O70481 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC16.33■□□□□ 0.21
Ubr1O70481 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
Ubr1O70481 Gm28071-201ENSMUST00000190355 478 ntBASIC16.33■□□□□ 0.21
Ubr1O70481 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ubr1O70481 Gm4607-201ENSMUST00000206649 577 ntBASIC16.33■□□□□ 0.21
Ubr1O70481 Gm44545-201ENSMUST00000208262 746 ntBASIC16.33■□□□□ 0.21
Ubr1O70481 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
Ubr1O70481 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC16.33■□□□□ 0.21
Ubr1O70481 D9Wsu149-201ENSMUST00000214169 594 ntBASIC16.33■□□□□ 0.21
Ubr1O70481 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC16.33■□□□□ 0.21
Ubr1O70481 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ubr1O70481 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Ubr1O70481 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ubr1O70481 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ubr1O70481 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Ubr1O70481 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ubr1O70481 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ubr1O70481 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ubr1O70481 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubr1O70481 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubr1O70481 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubr1O70481 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubr1O70481 Gm23596-201ENSMUST00000104304 132 ntBASIC16.33■□□□□ 0.2
Ubr1O70481 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.33■□□□□ 0.2
Ubr1O70481 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC16.33■□□□□ 0.2
Ubr1O70481 Gm10731-201ENSMUST00000181171 448 ntBASIC16.33■□□□□ 0.2
Ubr1O70481 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC16.33■□□□□ 0.2
Ubr1O70481 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC16.33■□□□□ 0.2
Ubr1O70481 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC16.33■□□□□ 0.2
Ubr1O70481 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ubr1O70481 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC16.33■□□□□ 0.2
Ubr1O70481 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC16.33■□□□□ 0.2
Ubr1O70481 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ubr1O70481 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubr1O70481 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ubr1O70481 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ubr1O70481 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.33■□□□□ 0.2
Ubr1O70481 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubr1O70481 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubr1O70481 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ubr1O70481 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ubr1O70481 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ubr1O70481 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Ubr1O70481 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC16.32■□□□□ 0.2
Ubr1O70481 Gm8365-201ENSMUST00000197334 648 ntBASIC16.32■□□□□ 0.2
Ubr1O70481 Gm4482-201ENSMUST00000200876 742 ntBASIC16.32■□□□□ 0.2
Ubr1O70481 AC166992.1-201ENSMUST00000216356 565 ntBASIC16.32■□□□□ 0.2
Ubr1O70481 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ubr1O70481 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubr1O70481 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC16.32■□□□□ 0.2
Ubr1O70481 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms