Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.28■□□□□ 0.04
Smarce1O54941 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarce1O54941 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Smarce1O54941 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smarce1O54941 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Smarce1O54941 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarce1O54941 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarce1O54941 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarce1O54941 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarce1O54941 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarce1O54941 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.27■□□□□ 0.04
Smarce1O54941 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarce1O54941 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarce1O54941 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarce1O54941 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smarce1O54941 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarce1O54941 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smarce1O54941 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarce1O54941 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarce1O54941 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smarce1O54941 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarce1O54941 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Smarce1O54941 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.27■□□□□ 0.04
Smarce1O54941 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smarce1O54941 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarce1O54941 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarce1O54941 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarce1O54941 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.27■□□□□ 0.04
Smarce1O54941 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smarce1O54941 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.27■□□□□ 0.03
Smarce1O54941 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.27■□□□□ 0.03
Smarce1O54941 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarce1O54941 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarce1O54941 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarce1O54941 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.26■□□□□ 0.03
Smarce1O54941 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.26■□□□□ 0.03
Smarce1O54941 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Smarce1O54941 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.26■□□□□ 0.03
Smarce1O54941 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smarce1O54941 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smarce1O54941 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.26■□□□□ 0.03
Smarce1O54941 Gm37917-201ENSMUST00000194711 392 ntBASIC15.26■□□□□ 0.03
Smarce1O54941 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.26■□□□□ 0.03
Smarce1O54941 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.26■□□□□ 0.03
Smarce1O54941 Gm18624-201ENSMUST00000220966 658 ntBASIC15.26■□□□□ 0.03
Smarce1O54941 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.26■□□□□ 0.03
Smarce1O54941 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smarce1O54941 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smarce1O54941 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.26■□□□□ 0.03
Smarce1O54941 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smarce1O54941 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.26■□□□□ 0.03
Smarce1O54941 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarce1O54941 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 CT573086.2-201ENSMUST00000227277 4992 ntBASIC15.25■□□□□ 0.03
Smarce1O54941 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.25■□□□□ 0.03
Smarce1O54941 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.25■□□□□ 0.03
Smarce1O54941 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smarce1O54941 Gm28693-202ENSMUST00000190758 331 ntBASIC15.25■□□□□ 0.03
Smarce1O54941 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.25■□□□□ 0.03
Smarce1O54941 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.25■□□□□ 0.03
Smarce1O54941 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.25■□□□□ 0.03
Smarce1O54941 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.25■□□□□ 0.03
Smarce1O54941 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smarce1O54941 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarce1O54941 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms