Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Limk2O54785 Gm24526-201ENSMUST00000082921 158 ntBASIC13.05□□□□□ -0.32
Limk2O54785 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.05□□□□□ -0.32
Limk2O54785 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.05□□□□□ -0.32
Limk2O54785 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.05□□□□□ -0.32
Limk2O54785 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.05□□□□□ -0.32
Limk2O54785 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Limk2O54785 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.04□□□□□ -0.32
Limk2O54785 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Limk2O54785 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Limk2O54785 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Limk2O54785 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Limk2O54785 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Gm12241-201ENSMUST00000118330 726 ntBASIC13.04□□□□□ -0.32
Limk2O54785 Gm13813-201ENSMUST00000120998 787 ntBASIC13.04□□□□□ -0.32
Limk2O54785 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.04□□□□□ -0.32
Limk2O54785 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.04□□□□□ -0.32
Limk2O54785 Gm25927-201ENSMUST00000175058 117 ntBASIC13.04□□□□□ -0.32
Limk2O54785 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.04□□□□□ -0.32
Limk2O54785 Gm38341-201ENSMUST00000195357 515 ntBASIC13.04□□□□□ -0.32
Limk2O54785 Gm8099-201ENSMUST00000200510 742 ntBASIC13.04□□□□□ -0.32
Limk2O54785 Olfr284-202ENSMUST00000206647 966 ntBASIC13.04□□□□□ -0.32
Limk2O54785 Gm19163-201ENSMUST00000223313 780 ntBASIC13.04□□□□□ -0.32
Limk2O54785 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Limk2O54785 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Limk2O54785 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Limk2O54785 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limk2O54785 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.03□□□□□ -0.32
Limk2O54785 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.03□□□□□ -0.32
Limk2O54785 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Snord83b-201ENSMUST00000104546 94 ntBASIC13.03□□□□□ -0.32
Limk2O54785 Gm14921-201ENSMUST00000118643 908 ntBASIC13.03□□□□□ -0.32
Limk2O54785 Gm12363-201ENSMUST00000122250 668 ntBASIC13.03□□□□□ -0.32
Limk2O54785 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.03□□□□□ -0.32
Limk2O54785 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.03□□□□□ -0.32
Limk2O54785 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.03□□□□□ -0.32
Limk2O54785 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.03□□□□□ -0.32
Limk2O54785 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.03□□□□□ -0.32
Limk2O54785 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Limk2O54785 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Limk2O54785 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.03□□□□□ -0.32
Limk2O54785 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Limk2O54785 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Limk2O54785 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.03□□□□□ -0.32
Limk2O54785 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.03□□□□□ -0.32
Limk2O54785 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limk2O54785 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Limk2O54785 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Limk2O54785 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Limk2O54785 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Limk2O54785 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms