Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Gm10371-202ENSMUST00000228010 1081 ntBASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Retreg1-206ENSMUST00000228306 1430 ntBASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Gm6580-201ENSMUST00000117504 1357 ntBASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Gm5455-201ENSMUST00000058710 715 ntBASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc180J3QNE4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Gm21811-201ENSMUST00000096485 930 ntBASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Mir680-2-201ENSMUST00000102163 110 ntBASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Gm23251-201ENSMUST00000103773 110 ntBASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Gm15711-201ENSMUST00000118889 535 ntBASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Ccdc180J3QNE4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Gm24231-201ENSMUST00000104315 133 ntBASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc180J3QNE4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.27
Ccdc180J3QNE4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Ccdc180J3QNE4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 Gm14058-201ENSMUST00000116082 735 ntBASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 Gm3508-201ENSMUST00000186012 792 ntBASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC23.01■■□□□ 1.27
Ccdc180J3QNE4 Gm4482-201ENSMUST00000200876 742 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms