Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.8□□□□□ -0.36
Gm3139J3QK78 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.8□□□□□ -0.36
Gm3139J3QK78 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Gm12241-201ENSMUST00000118330 726 ntBASIC12.8□□□□□ -0.36
Gm3139J3QK78 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Gm27516-201ENSMUST00000184237 98 ntBASIC12.8□□□□□ -0.36
Gm3139J3QK78 Gm37489-201ENSMUST00000191883 159 ntBASIC12.8□□□□□ -0.36
Gm3139J3QK78 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Gm9368-201ENSMUST00000219348 831 ntBASIC12.8□□□□□ -0.36
Gm3139J3QK78 Gm45930-201ENSMUST00000221330 292 ntBASIC12.8□□□□□ -0.36
Gm3139J3QK78 Gm7046-201ENSMUST00000221351 977 ntBASIC12.8□□□□□ -0.36
Gm3139J3QK78 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3139J3QK78 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.79□□□□□ -0.36
Gm3139J3QK78 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Gm15370-201ENSMUST00000117158 253 ntBASIC12.79□□□□□ -0.36
Gm3139J3QK78 Gm13297-201ENSMUST00000120205 934 ntBASIC12.79□□□□□ -0.36
Gm3139J3QK78 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gm3139J3QK78 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.79□□□□□ -0.36
Gm3139J3QK78 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Olfr582-201ENSMUST00000098212 960 ntBASIC12.79□□□□□ -0.36
Gm3139J3QK78 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.79□□□□□ -0.36
Gm3139J3QK78 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.79□□□□□ -0.36
Gm3139J3QK78 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.79□□□□□ -0.36
Gm3139J3QK78 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3139J3QK78 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.78□□□□□ -0.36
Gm3139J3QK78 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Gm4986-201ENSMUST00000119731 549 ntBASIC12.78□□□□□ -0.36
Gm3139J3QK78 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Gm8227-201ENSMUST00000223306 571 ntBASIC12.78□□□□□ -0.36
Gm3139J3QK78 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.78□□□□□ -0.36
Gm3139J3QK78 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3139J3QK78 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms