Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Gm6198-201ENSMUST00000191337 2929 ntBASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 AC154680.1-201ENSMUST00000224376 859 ntBASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Ntng1-201ENSMUST00000051253 327 ntBASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Gm45643-201ENSMUST00000211364 1484 ntBASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcf11G3X9Z4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Gm44291-201ENSMUST00000203102 2865 ntBASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Gm9361-201ENSMUST00000198695 1507 ntBASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Gm8199-201ENSMUST00000121323 823 ntBASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Gm12164-201ENSMUST00000121695 551 ntBASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Gm43081-201ENSMUST00000199082 1380 ntBASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Gm38058-201ENSMUST00000194323 4368 ntBASIC19.1■□□□□ 0.65
Pcf11G3X9Z4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Gm38346-201ENSMUST00000192379 2639 ntBASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Mir680-2-201ENSMUST00000102163 110 ntBASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Gm23251-201ENSMUST00000103773 110 ntBASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Gm7851-201ENSMUST00000117574 323 ntBASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Gm13408-201ENSMUST00000119822 798 ntBASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Gm13935-201ENSMUST00000121859 798 ntBASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Gm270-201ENSMUST00000223010 976 ntBASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 CT009713.8-201ENSMUST00000225448 560 ntBASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcf11G3X9Z4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcf11G3X9Z4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms