Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Gm27701-201ENSMUST00000184498 110 ntBASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Gm6745-201ENSMUST00000199216 526 ntBASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Gm12928-201ENSMUST00000117115 573 ntBASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Gm28911-201ENSMUST00000188837 117 ntBASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Gm44124-201ENSMUST00000204159 472 ntBASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Gm9908-201ENSMUST00000211534 448 ntBASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh9F8VPK8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Gm8463-201ENSMUST00000208573 613 ntBASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh9F8VPK8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Pcdh9F8VPK8 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh9F8VPK8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh9F8VPK8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh9F8VPK8 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.15□□□□□ -0.31
Pcdh9F8VPK8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh9F8VPK8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms