Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc188F6WEU2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Gm16296-201ENSMUST00000159905 325 ntBASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Gm5870-201ENSMUST00000196461 282 ntBASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Gm4157-201ENSMUST00000211647 679 ntBASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Gm40879-201ENSMUST00000220759 612 ntBASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc188F6WEU2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc188F6WEU2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms