Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Syngap1F6SEU4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syngap1F6SEU4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Syngap1F6SEU4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syngap1F6SEU4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syngap1F6SEU4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Gm25880-201ENSMUST00000104331 132 ntBASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Gm12363-201ENSMUST00000122250 668 ntBASIC14.44□□□□□ -0.1
Syngap1F6SEU4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Gm10179-201ENSMUST00000086233 688 ntBASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syngap1F6SEU4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Gm24548-201ENSMUST00000158650 108 ntBASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.43□□□□□ -0.1
Syngap1F6SEU4 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syngap1F6SEU4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Gm13408-201ENSMUST00000119822 798 ntBASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Gm13935-201ENSMUST00000121859 798 ntBASIC14.42□□□□□ -0.1
Syngap1F6SEU4 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Gm4768-201ENSMUST00000206199 686 ntBASIC14.42□□□□□ -0.1
Syngap1F6SEU4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.42□□□□□ -0.1
Syngap1F6SEU4 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syngap1F6SEU4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syngap1F6SEU4 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms