Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ube4aE9Q735 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.39■□□□□ 0.05
Ube4aE9Q735 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ube4aE9Q735 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Gm14208-201ENSMUST00000119645 678 ntBASIC15.38■□□□□ 0.05
Ube4aE9Q735 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Gm6963-201ENSMUST00000147879 379 ntBASIC15.38■□□□□ 0.05
Ube4aE9Q735 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Rprl1-202ENSMUST00000198476 238 ntBASIC15.38■□□□□ 0.05
Ube4aE9Q735 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.38■□□□□ 0.05
Ube4aE9Q735 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.38■□□□□ 0.05
Ube4aE9Q735 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.38■□□□□ 0.05
Ube4aE9Q735 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ube4aE9Q735 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.38■□□□□ 0.05
Ube4aE9Q735 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4aE9Q735 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.37■□□□□ 0.05
Ube4aE9Q735 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.37■□□□□ 0.05
Ube4aE9Q735 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Mir5120-201ENSMUST00000175020 78 ntBASIC15.37■□□□□ 0.05
Ube4aE9Q735 Gm5070-201ENSMUST00000177599 862 ntBASIC15.37■□□□□ 0.05
Ube4aE9Q735 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Gzmn-202ENSMUST00000225535 989 ntBASIC15.37■□□□□ 0.05
Ube4aE9Q735 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Ube4aE9Q735 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms