Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm12030-201ENSMUST00000121917 223 ntBASIC10.3□□□□□ -0.76
Chd6A3KFM7 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm4654-201ENSMUST00000183305 982 ntBASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm18968-201ENSMUST00000221319 862 ntBASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm23604-201ENSMUST00000104311 132 ntBASIC10.3□□□□□ -0.76
Chd6A3KFM7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm9135-201ENSMUST00000182963 990 ntBASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm28882-201ENSMUST00000185504 314 ntBASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Gm6905-201ENSMUST00000205729 511 ntBASIC10.3□□□□□ -0.76
Chd6A3KFM7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd6A3KFM7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.29□□□□□ -0.76
Chd6A3KFM7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.29□□□□□ -0.76
Chd6A3KFM7 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.29□□□□□ -0.76
Chd6A3KFM7 Gm4462-201ENSMUST00000166453 492 ntBASIC10.29□□□□□ -0.76
Chd6A3KFM7 Gm2345-201ENSMUST00000193451 589 ntBASIC10.29□□□□□ -0.76
Chd6A3KFM7 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Gm807-202ENSMUST00000224929 408 ntBASIC10.29□□□□□ -0.76
Chd6A3KFM7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.29□□□□□ -0.76
Chd6A3KFM7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.29□□□□□ -0.76
Chd6A3KFM7 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.29□□□□□ -0.76
Chd6A3KFM7 AC138716.2-201ENSMUST00000226670 1016 ntBASIC10.29□□□□□ -0.76
Chd6A3KFM7 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Chd6A3KFM7 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Chd6A3KFM7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Chd6A3KFM7 Gm25053-201ENSMUST00000103982 133 ntBASIC10.28□□□□□ -0.76
Chd6A3KFM7 Gm25922-201ENSMUST00000104281 130 ntBASIC10.28□□□□□ -0.76
Chd6A3KFM7 Gm16166-201ENSMUST00000118291 787 ntBASIC10.28□□□□□ -0.76
Chd6A3KFM7 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.28□□□□□ -0.76
Chd6A3KFM7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.28□□□□□ -0.76
Chd6A3KFM7 Gm24679-201ENSMUST00000158762 111 ntBASIC10.28□□□□□ -0.76
Chd6A3KFM7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.28□□□□□ -0.76
Chd6A3KFM7 Gm25053-202ENSMUST00000199731 132 ntBASIC10.28□□□□□ -0.76
Chd6A3KFM7 Gm43962-201ENSMUST00000203898 190 ntBASIC10.28□□□□□ -0.76
Chd6A3KFM7 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.28□□□□□ -0.76
Chd6A3KFM7 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.28□□□□□ -0.76
Chd6A3KFM7 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.28□□□□□ -0.76
Chd6A3KFM7 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Chd6A3KFM7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Chd6A3KFM7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd6A3KFM7 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms