Protein–RNA interactions for Protein: Q9Z1N5

Ddx39b, Spliceosome RNA helicase Ddx39b, mousemouse

Known RBP Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39bQ9Z1N5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39bQ9Z1N5 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx39bQ9Z1N5 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Ddx39bQ9Z1N5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Gm8598-201ENSMUST00000221184 836 ntBASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx39bQ9Z1N5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms