Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Phf1Q9Z1B8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Phf1Q9Z1B8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Phf1Q9Z1B8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Phf1Q9Z1B8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Phf1Q9Z1B8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Phf1Q9Z1B8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Phf1Q9Z1B8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Phf1Q9Z1B8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Phf1Q9Z1B8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Gm19309-201ENSMUST00000218295 205 ntBASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Snora73a-201ENSMUST00000082453 205 ntBASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Phf1Q9Z1B8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Gm22018-201ENSMUST00000104357 131 ntBASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Mir874-201ENSMUST00000104769 76 ntBASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Gm6013-201ENSMUST00000212264 699 ntBASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Gm16372-201ENSMUST00000073088 450 ntBASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Phf1Q9Z1B8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms