Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Gm15806-201ENSMUST00000120696 955 ntBASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Gm8810-201ENSMUST00000172895 754 ntBASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Gm9794-201ENSMUST00000202370 423 ntBASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Gm10012-201ENSMUST00000078252 192 ntBASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.37□□□□□ -0.43
Cldn9Q9Z0S7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Gm11814-201ENSMUST00000119515 929 ntBASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Gm2231-201ENSMUST00000125661 612 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms