Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.46□□□□□ -0.57
Nubp2Q9R061 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Gm12390-201ENSMUST00000117897 397 ntBASIC11.46□□□□□ -0.57
Nubp2Q9R061 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.46□□□□□ -0.57
Nubp2Q9R061 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Nubp2Q9R061 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Nubp2Q9R061 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.46□□□□□ -0.57
Nubp2Q9R061 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.46□□□□□ -0.57
Nubp2Q9R061 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nubp2Q9R061 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nubp2Q9R061 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Nubp2Q9R061 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nubp2Q9R061 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Nubp2Q9R061 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nubp2Q9R061 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nubp2Q9R061 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Nubp2Q9R061 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nubp2Q9R061 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.46□□□□□ -0.58
Nubp2Q9R061 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Nubp2Q9R061 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Nubp2Q9R061 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Nubp2Q9R061 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.45□□□□□ -0.58
Nubp2Q9R061 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Gm11425-201ENSMUST00000119608 498 ntBASIC11.45□□□□□ -0.58
Nubp2Q9R061 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Gm6152-201ENSMUST00000151704 340 ntBASIC11.45□□□□□ -0.58
Nubp2Q9R061 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Mir7221-201ENSMUST00000184009 72 ntBASIC11.45□□□□□ -0.58
Nubp2Q9R061 Gm29649-201ENSMUST00000185649 419 ntBASIC11.45□□□□□ -0.58
Nubp2Q9R061 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.45□□□□□ -0.58
Nubp2Q9R061 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.45□□□□□ -0.58
Nubp2Q9R061 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Itm2b-204ENSMUST00000228637 783 ntBASIC11.45□□□□□ -0.58
Nubp2Q9R061 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Gm9396-201ENSMUST00000076703 567 ntBASIC11.45□□□□□ -0.58
Nubp2Q9R061 Gm10012-201ENSMUST00000078252 192 ntBASIC11.45□□□□□ -0.58
Nubp2Q9R061 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nubp2Q9R061 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nubp2Q9R061 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nubp2Q9R061 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms