Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Scn11aQ9R053 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Scn11aQ9R053 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15□□□□□ -0.01
Scn11aQ9R053 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Gm12286-201ENSMUST00000119246 1002 ntBASIC15□□□□□ -0.01
Scn11aQ9R053 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15□□□□□ -0.01
Scn11aQ9R053 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15□□□□□ -0.01
Scn11aQ9R053 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Gm27552-201ENSMUST00000183351 62 ntBASIC15□□□□□ -0.01
Scn11aQ9R053 Gm27844-201ENSMUST00000183613 62 ntBASIC15□□□□□ -0.01
Scn11aQ9R053 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15□□□□□ -0.01
Scn11aQ9R053 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15□□□□□ -0.01
Scn11aQ9R053 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15□□□□□ -0.01
Scn11aQ9R053 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15□□□□□ -0.01
Scn11aQ9R053 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn11aQ9R053 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Gm27530-201ENSMUST00000184096 98 ntBASIC14.99□□□□□ -0.01
Scn11aQ9R053 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Gm7848-201ENSMUST00000210739 718 ntBASIC14.99□□□□□ -0.01
Scn11aQ9R053 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scn11aQ9R053 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.98□□□□□ -0.01
Scn11aQ9R053 Gm13045-201ENSMUST00000119019 712 ntBASIC14.98□□□□□ -0.01
Scn11aQ9R053 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.98□□□□□ -0.01
Scn11aQ9R053 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Gm17827-201ENSMUST00000211825 742 ntBASIC14.98□□□□□ -0.01
Scn11aQ9R053 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.98□□□□□ -0.01
Scn11aQ9R053 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.98□□□□□ -0.01
Scn11aQ9R053 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.98□□□□□ -0.01
Scn11aQ9R053 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.98□□□□□ -0.01
Scn11aQ9R053 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.98□□□□□ -0.01
Scn11aQ9R053 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.98□□□□□ -0.01
Scn11aQ9R053 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.98□□□□□ -0.01
Scn11aQ9R053 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.98□□□□□ -0.01
Scn11aQ9R053 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn11aQ9R053 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn11aQ9R053 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms