Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gm12859-201ENSMUST00000117834 427 ntBASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gm23958-201ENSMUST00000157207 105 ntBASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gm28631-201ENSMUST00000190740 334 ntBASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Trim39Q9ESN2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trim39Q9ESN2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.08□□□□□ -0.47
Trim39Q9ESN2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim39Q9ESN2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm12403-201ENSMUST00000121384 959 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm24447-201ENSMUST00000083977 338 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim39Q9ESN2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms