Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmg20aQ9DC33 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Gm13823-201ENSMUST00000119930 345 ntBASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Gm6222-201ENSMUST00000120787 396 ntBASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmg20aQ9DC33 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Rprl2-201ENSMUST00000157150 290 ntBASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Gm7063-201ENSMUST00000186840 981 ntBASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Gm19931-201ENSMUST00000198920 368 ntBASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmg20aQ9DC33 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmg20aQ9DC33 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms