Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3a3Q9D554 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13□□□□□ -0.33
Sf3a3Q9D554 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13□□□□□ -0.33
Sf3a3Q9D554 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sf3a3Q9D554 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13□□□□□ -0.33
Sf3a3Q9D554 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Gm13859-201ENSMUST00000119936 1423 ntBASIC13□□□□□ -0.33
Sf3a3Q9D554 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sf3a3Q9D554 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13□□□□□ -0.33
Sf3a3Q9D554 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13□□□□□ -0.33
Sf3a3Q9D554 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sf3a3Q9D554 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sf3a3Q9D554 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Sf3a3Q9D554 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3a3Q9D554 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3a3Q9D554 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.99□□□□□ -0.33
Sf3a3Q9D554 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3a3Q9D554 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sf3a3Q9D554 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3a3Q9D554 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3a3Q9D554 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms