Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Gm22189-201ENSMUST00000103822 86 ntBASIC12.18□□□□□ -0.46
Upk1aQ9D132 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.18□□□□□ -0.46
Upk1aQ9D132 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Mir8102-201ENSMUST00000184148 139 ntBASIC12.18□□□□□ -0.46
Upk1aQ9D132 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.18□□□□□ -0.46
Upk1aQ9D132 Gm19184-201ENSMUST00000196798 928 ntBASIC12.18□□□□□ -0.46
Upk1aQ9D132 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.18□□□□□ -0.46
Upk1aQ9D132 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.18□□□□□ -0.46
Upk1aQ9D132 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk1aQ9D132 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.17□□□□□ -0.46
Upk1aQ9D132 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Gm42550-201ENSMUST00000201553 960 ntBASIC12.17□□□□□ -0.46
Upk1aQ9D132 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.17□□□□□ -0.46
Upk1aQ9D132 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.17□□□□□ -0.46
Upk1aQ9D132 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Gm28760-201ENSMUST00000185995 736 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms