Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Gm5161-201ENSMUST00000075243 853 ntBASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Gm27680-201ENSMUST00000184192 160 ntBASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Gm24447-201ENSMUST00000083977 338 ntBASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Cog3-203ENSMUST00000227473 4197 ntBASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chaf1bQ9D0N7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Chaf1bQ9D0N7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Gm22175-201ENSMUST00000175007 78 ntBASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chaf1bQ9D0N7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms