Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.92□□□□□ -0.5
Trim13Q9CYB0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.92□□□□□ -0.5
Trim13Q9CYB0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Gm17795-201ENSMUST00000214505 757 ntBASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Gm5161-201ENSMUST00000075243 853 ntBASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim13Q9CYB0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Gm14767-201ENSMUST00000121559 586 ntBASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Gm38144-201ENSMUST00000192790 465 ntBASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim13Q9CYB0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim13Q9CYB0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms