Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ssu72Q9CY97 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssu72Q9CY97 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Ssu72Q9CY97 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.77□□□□□ -0.36
Ssu72Q9CY97 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.77□□□□□ -0.36
Ssu72Q9CY97 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssu72Q9CY97 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ssu72Q9CY97 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssu72Q9CY97 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.77□□□□□ -0.36
Ssu72Q9CY97 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssu72Q9CY97 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssu72Q9CY97 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Gm44069-201ENSMUST00000204898 506 ntBASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Gm9797-201ENSMUST00000052902 613 ntBASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ssu72Q9CY97 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Gm15371-201ENSMUST00000117057 784 ntBASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Gm5687-201ENSMUST00000118252 640 ntBASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Gm27306-201ENSMUST00000183970 107 ntBASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Gm20445-201ENSMUST00000061905 565 ntBASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssu72Q9CY97 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Gm14350-201ENSMUST00000116642 640 ntBASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Gm16202-201ENSMUST00000117532 544 ntBASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Gm14921-201ENSMUST00000118643 908 ntBASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Gm14760-201ENSMUST00000121831 999 ntBASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Gm11594-201ENSMUST00000122313 162 ntBASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.75□□□□□ -0.37
Ssu72Q9CY97 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms