Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc3Q9CW03 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc3Q9CW03 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smc3Q9CW03 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Smc3Q9CW03 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc3Q9CW03 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.12■□□□□ 0.01
Smc3Q9CW03 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
Smc3Q9CW03 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.12■□□□□ 0.01
Smc3Q9CW03 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.12■□□□□ 0.01
Smc3Q9CW03 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.12■□□□□ 0.01
Smc3Q9CW03 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Smc3Q9CW03 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Gm6152-201ENSMUST00000151704 340 ntBASIC15.11■□□□□ 0.01
Smc3Q9CW03 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Smc3Q9CW03 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.11■□□□□ 0.01
Smc3Q9CW03 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Gm16372-201ENSMUST00000073088 450 ntBASIC15.11■□□□□ 0.01
Smc3Q9CW03 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.11■□□□□ 0.01
Smc3Q9CW03 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc3Q9CW03 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.11■□□□□ 0.01
Smc3Q9CW03 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Gm12859-201ENSMUST00000117834 427 ntBASIC15.1■□□□□ 0.01
Smc3Q9CW03 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.1■□□□□ 0.01
Smc3Q9CW03 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.1■□□□□ 0.01
Smc3Q9CW03 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.1■□□□□ 0.01
Smc3Q9CW03 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.1■□□□□ 0.01
Smc3Q9CW03 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms