Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gm15198-201ENSMUST00000117283 177 ntBASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gm22121-201ENSMUST00000175148 54 ntBASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gm36991-201ENSMUST00000191800 648 ntBASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gm38158-201ENSMUST00000194617 339 ntBASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gm6013-201ENSMUST00000212264 699 ntBASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Olfr582-201ENSMUST00000098212 960 ntBASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.22□□□□□ -0.45
Otud1Q9CUB6 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Gm11793-201ENSMUST00000120433 981 ntBASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Gm7430-201ENSMUST00000193824 1144 ntBASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Otud1Q9CUB6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.22□□□□□ -0.45
Otud1Q9CUB6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Otud1Q9CUB6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms