Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1aQ9CU62 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1aQ9CU62 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1aQ9CU62 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Gm11803-201ENSMUST00000119966 444 ntBASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Gm5161-201ENSMUST00000075243 853 ntBASIC14.42□□□□□ -0.1
Smc1aQ9CU62 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1aQ9CU62 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Gm5187-201ENSMUST00000117317 991 ntBASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Gm6152-201ENSMUST00000151704 340 ntBASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.41□□□□□ -0.1
Smc1aQ9CU62 Matn2-203ENSMUST00000226766 3252 ntBASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1aQ9CU62 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.4□□□□□ -0.1
Smc1aQ9CU62 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms