Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 AC154572.2-201ENSMUST00000225105 997 ntBASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39lQ9CQD0 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Gm43721-201ENSMUST00000199677 2313 ntBASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Gm7229-201ENSMUST00000214719 1007 ntBASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 AC121804.3-201ENSMUST00000223420 295 ntBASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39lQ9CQD0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Rpl39lQ9CQD0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Rpl39lQ9CQD0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Rpl39lQ9CQD0 Gm5053-201ENSMUST00000208361 1678 ntBASIC8.34□□□□□ -1.08
Rpl39lQ9CQD0 Gm43727-201ENSMUST00000198021 2647 ntBASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Gm6210-201ENSMUST00000204734 1942 ntBASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Gm7224-201ENSMUST00000121359 2066 ntBASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39lQ9CQD0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms